BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F02SP1|AL429426
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1411 1500 0.0
>3x_Contig1411
Length = 7271
Score = 1500 bits (753), Expect = 0.0
Identities = 841/861 (97%), Gaps = 10/861 (1%)
Strand = Plus / Plus
Query: 1 agtctcatcatcttatgctacacaaatctttttakcatcatggtgaagttgctgcagtya 60
||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 2664 agtctcatcatctgaagctacacaaatctttttagcatca-ggtgaagttgctgcagtca 2722
Query: 61 atgcacgtaattkgtttggttgtttgattcgtattatctctttccatgtgagtggatatc 120
|||||||||||| | ||||||||||||||||||||||||||| ||||| ||| ||||| |
Sbjct: 2723 atgcacgtaattgggttggttgtttgattcgtattatctctt-ccatg-gag-ggatagc 2779
Query: 121 tgtacattatgatgaaaactggaagttcttgattggtgaatccgaatgtctaccaatagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2780 tgtacattatgatgaaaactggaagttcttgattggtgaatccgaatgtc-accaatagt 2838
Query: 181 tgtttttgtcctttggaccatattatggacgttatttggcctggtgtcttgaattctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2839 tgtttttgtcctttggaccatattatggacgttatttggcctggtgtcttgaattctctg 2898
Query: 241 agcaatgttccgcttttcgaatgccaaaaccttagatgtctatcgtaacttcctcctccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2899 agcaatgttccgcttttcgaatgccaaaaccttagatgtctatcgtaacttcctcctccg 2958
Query: 301 gtaacaaataacgctttcgaccaaggacaaaaggccatagctttcacagcagaggcgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2959 gtaacaaataacgctttcgaccaaggacaaaaggccatagctttcacagcagaggcgtgc 3018
Query: 361 tttaatttaaactgtaattcaggttcctcatcgagatcattttcgttatatttgcatatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3019 tttaatttaaactgtaattcaggttcctcatcgagatcattttcgttatatttgcatatg 3078
Query: 421 gtacaacaattgtcattgcctcctaaggctatttgattagtttcttcacaaattttgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3079 gtacaacaattgtcattgcctcctaaggctatttgattagtttcttcacaaattttgata 3138
Query: 481 ccacatatttgttgtgaatgtacgtgtaaagaccacgattctcctatttyatggcgtttg 540
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 3139 ccacatatttgttgtgaatgtacgtgtaaagaccacgattctcctattttatgg-gtttg 3197
Query: 541 tatcactttctcagagcttcagttccgctgaagttccattgatcttggctcgcaaagtat 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3198 tatcactttctcagag-ttcagttccgctgaagttccattgatcttggctcgcaaagtat 3256
Query: 601 ctgttcgcctcaatgatcgtgcaatgactataagtbcggtcttgatattaaacttgtata 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3257 ctgttcgcctcaatgatcgtgcaatgactataagttcggtcttgatattaaacttgtata 3316
Query: 661 cgacaccaacttctgtacctacaataaattgattcccatctttgaaccattggcagcagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3317 cgacaccaacttctgtacctacaataaattgattcccatctttgaaccattggcagcagc 3376
Query: 721 atattccactatgacatttcactgtaatttcaatcaaaggctttggaggtccgctgccta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3377 atattccactatgacatttcactgtaatttcaatcaaaggctttggaggtccgctgccta 3436
Query: 781 tgttgttctccacactttcctgactaaatatkaagatcttg-cccgcttggtt-cgacga 838
||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct: 3437 tgttgttctccacactttcctgactaaatatgaagatcttgccccgcttggttccgacga 3496
Query: 839 gt-aaaaatctttggagctaa 858
|| ||||||||||||||||||
Sbjct: 3497 gtaaaaaatctttggagctaa 3517
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5802
Number of Sequences: 1807
Number of extensions: 5802
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)